Job Description P75804 Confidence 99.75% Date Thu Jan 5 12:14:23 GMT 2012 Rank 20 Aligned Residues 288 % Identity 8% Template c2z2pA_ PDB info PDB header:lyase/antibiotic Chain: A: PDB Molecule:virginiamycin b lyase; PDBTitle: crystal structure of catalytically inactive h270a virginiamycin b2 lyase from staphylococcus aureus with quinupristin Resolution 2.80 Å

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		25	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		V	N	V	E	V	L	Q	.	.	D	K	L	D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L
Query Conservation									.	.
Alig confidence									.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	L	Q	E	L	N	L	T	N	Q	D	T	G	P	Y	G	I	T	V	S	D	K	G	K	V	W	I	T	Q	H	K	A	N	M	I	S	C	I	N	L	D	G	K	I	T	E	Y	E	L	P	.	.	.	.	.	.	.	.	.	.	N	K	G	A	K	V	M	C	L	T	I	S	S	D	G	E	V	W	F
Template Known Secondary structure										S			S										S	S	S							T	T	T	T							T	T	S								S	.	.	.	.	.	.	.	.	.	.	S	S											T	T	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	N	A	A	N	K	I	G	R	I	T	K	K	G	I	I	K	E	Y	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	P	D	S	A	P	Y	G	I	T	E	G	P	N	G	D	I	W	F	T	E	M	N	G	N	R	I	G	R	I	T	D	D	G	K	I	R	E	Y
Template Known Secondary structure				T	T	T	T							T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	T	T										T	T	S							T	T	T	T							S	S			B
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S
Query Conservation
Alig confidence									.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		E	L	P	N	K	G	S	.	.	.	.	.	.	Y	P	S	F	I	T	L	G	S	D	N	A	L	W	F	T	E	N	Q	N	N	A	I	G	R	I	T	E	S	G	D	I	T	E	F	K	I	P	T	P	A	S	G	P	V	G	I	T	K	G	N	D	D	A	L	W	F	V	E	I	I	G	N	K	I	G	R
Template Known Secondary structure				S	S	T	T		.	.	.	.	.	.									T	T	S	S						T	T	T	T							T	T									S	S	T	T										T	T	S	S						T	T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		I	T	T	S	G	E	I	T	E	F	K	I	P	T	P	N	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	A	I	T	A	G	A	G	I	D	L	W	F	T	E	W	G	A	N	K	I	G	R	L	T	S	N	N	I	I	E	E	.	.	.	Y	P	I	Q	I	K	S	A	E	P
Template Known Secondary structure				S	S									S	S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	T	T							T	T	T	T							G	G	G					.	.	.					S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V	S
Query Conservation
Alig confidence									.								.	.
Template Conservation									.								.	.
Template Sequence		A	G	I	C	F	D	G	.	E	T	I	W	F	A	M	.	.	E	C	D	K	I	G	K	L	T
Template Known Secondary structure								S	.	S							.	.	T	T	T
Template Predicted Secondary structure									.								.	.
Template SS confidence
		270	.	.	.	.	.	.		.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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