Job Description P75804 Confidence 83.26% Date Thu Jan 5 12:14:23 GMT 2012 Rank 170 Aligned Residues 280 % Identity 12% Template c2vz1A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:galactose oxidase; PDBTitle: premat-galactose oxidase Resolution 1.91 Å

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		37	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.									.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure										.											.	.	.	.	.	.	.	.				.	.	.
Query SS confidence										.											.	.	.	.	.	.	.	.				.	.	.
Query Sequence		P	W	A	L	A	F	L	P	.	D	N	H	G	M	L	I	T	L	R	.	.	.	.	.	.	.	.	G	G	E	.	.	.	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y
Query Conservation										.											.	.	.	.	.	.	.	.				.	.	.
Alig confidence										.											.	.	.	.	.	.	.	.				.	.	.																				.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.
Template Sequence		P	A	A	A	A	I	E	P	T	S	G	R	V	L	M	W	S	S	Y	R	N	D	A	F	G	G	S	P	G	G	I	T	L	T	S	S	W	D	P	S	T	G	I	V	S	D	R	T	V	T	V	T	.	.	.	.	.	.	.	K	H	D	M	F	C	P	G	I	S	M	D	G	N	G	Q	I	V	V	T	G
Template Known Secondary structure			S						T	T	T	T							S	S	S	S	S			T	T			S	S									T	T	T										T	T	.	.	.	.	.	.	.					S	S							T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																							.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																							.	.	.	.	.	.	.
Template Sequence		G	N	D	A	K	K	T	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	S	S	S	D	S	W	I	P	G	P	D	M	Q	V	A	R	G	Y	Q	S	S	A	T	M	.	S	D	G	R	V	F	T	I	G	G	S	W	S	G	G	V	F	E	K	N	G	E	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T									S	S			B	S							.	T	T	S								B	T	S	S		S	S						.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																							.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.																.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.															.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	S	P	S	S	K	T	W	T	S	L	P	N	A	K	V	N	P	M	L	T	A	D	K	Q	G	L	Y	R	S	D	N	H	A	W	L	F	G	W	K	K	G	S	V	F	Q	A	.	.	G	P	S	T	A	M	N	W	Y	Y	T	S	G	S	G	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T						T	T	S		S	G	G	G					T	T	T					T	S	S							G	G	G						.	.		S	S	S								S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template SS confidence
															301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																														.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	S	G	M	A	F	Y	N	S	D	K	F
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	A	G	K	R	Q	S	N	R	G	V	A	P	D	A	M	C	G	N	A	V	M	Y	D	A	V	K	G	K	I	L	T	F	G	G	S	P	D	Y	Q	D	S	D	A	T	T	N	A	H	I	I	T	L	G	E	P	G	T	S	P	N	T	V	F	A	S	N	G	L	Y	F	A	R	T	F	H	T	S	V
Template Known Secondary structure										T	T							B	T								T	T	T	T								B	S	S	S	S	S	S	B												S	T	T	S								T	T			S	S			B	S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.												.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	.	.	.	.	.	.	.	.	.	.	.	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																									.
Template Sequence		V	L	P	D	G	S	T	F	I	T	G	G	Q	R	R	G	I	P	F	E	D	S	T	P	V	F	T	P	E	I	Y	V	P	E	Q	D	T	F	Y	.	K	Q	N	P	N	S	I	V	R	V	Y	H	S	I	S	L	L	L	P	D	G	R	V	F	N	G	G	G	G	L	C	G
Template Known Secondary structure				T	T	S								B	S	B			T	T				S	B									G	G	G	T				.						S	S				T	T							T	T	S											T
Template Predicted Secondary structure																																									.
Template SS confidence
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions