Job Description P75804 Confidence 99.78% Date Thu Jan 5 12:14:23 GMT 2012 Rank 17 Aligned Residues 284 % Identity 10% Template c2qc5A_ PDB info PDB header:lyase Chain: A: PDB Molecule:streptogramin b lactonase; PDBTitle: streptogramin b lyase structure Resolution 1.80 Å

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		23	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	T	V	N	V	E	V	L	Q	D	K	.	.	L	D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I
Query Conservation													.	.
Alig confidence													.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	F	Y	L	E	E	F	N	L	S	I	P	D	S	G	P	Y	G	I	T	S	S	E	D	G	K	V	W	F	T	Q	H	K	A	N	K	I	S	S	L	D	Q	S	G	R	I	K	E	F	E	V	P	.	.	.	.	.	.	.	.	.	.	T	P	D	A	K	V	M	C	L	I	V	S	S	L	G	D	I
Template Known Secondary structure		G	S									S	S	T	T										T	T	S							T	T	T	T							T	T	S								S	.	.	.	.	.	.	.	.	.	.	S	T	T										T	T	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	F	T	E	N	G	A	N	K	I	G	K	L	S	K	K	G	G	F	T	E	Y	P	L	P	Q	P	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	Y	G	I	T	E	G	L	N	G	D	I	W	F	T	Q	L	N	G	D	R	I	G	K	L	T	A	D	G	T	I	Y
Template Known Secondary structure						T	T	T	T							T	T	S								S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	T	T							T	T	T	T							T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		E	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	N	K	G	S	Y	P	A	F	I	T	L	G	S	D	N	A	L	W	F	T	E	.	.	N	Q	N	N	S	I	G	R	I	T	N	T	G	K	L	E	E	Y	P	L	P	T	N	A	A	A	P
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T										T	T	S	S						.	.	T	T	T	T							T	T									S	S	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		133	.	.																										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	.	.	.	.	.	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L
Query Conservation																																												.	.	.	.	.
Alig confidence																																												.	.	.	.	.																												.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		V	G	I	T	S	G	N	D	G	A	L	W	F	V	E	I	M	G	N	K	I	G	R	I	T	T	T	G	E	I	S	E	Y	D	I	P	T	P	N	A	R	P	H	A	I	T	A	G	K	N	S	E	I	W	F	T	E	W	G	A	N	Q	I	G	R	I	T	N	D	N	T	I	Q	E	.	.	.	Y	Q	L
Template Known Secondary structure								T	T	S	S						T	T	T	T							T	T									S	S	T	T										S	T	T							T	T	T	T							T	T	S					.	.	.
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	E	N	A	E	P	H	G	I	T	F	G	K	D	G	S	V	W	F	A	L	K	C	K	I	G	K	L
Template Known Secondary structure			S	T	T										T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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