Job Description P75804 Confidence 99.38% Date Thu Jan 5 12:14:23 GMT 2012 Rank 64 Aligned Residues 294 % Identity 8% Template c2j57J_ PDB info PDB header:oxidoreductase Chain: J: PDB Molecule:methylamine dehydrogenase heavy chain; PDBTitle: x-ray reduced paraccocus denitrificans methylamine2 dehydrogenase n-quinol in complex with amicyanin. Resolution 2.25 Å

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		43	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																																															.
Query SS confidence												.	.	.	.	.																																															.
Query Sequence		L	P	D	N	H	G	M	L	I	T	.	.	.	.	.	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	.	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A
Query Conservation												.	.	.	.	.																																															.
Alig confidence												.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	D	A	R	R	V	Y	V	N	D	P	A	H	F	A	A	V	T	Q	Q	F	V	I	D	G	E	A	G	R	V	I	G	M	I	.	.	.	.	.	.	.	.	.	.	.	.	D	G	G	F	L	P	N	P	V	V	A	D	D	G	S	F	I	A	H	A	S	T	V	F	S	R	I	A	R	G	E	R	T
Template Known Secondary structure					T	T								G	G	G		S	S								T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.				S	S							T	T	S	S												T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.													.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	.	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D
Query Conservation																																																			.
Alig confidence															.	.																																			.														.	.
Template Conservation															.	.																																																	.	.
Template Sequence		D	Y	V	E	V	F	D	P	V	T	L	L	P	.	.	T	A	D	I	E	L	P	D	A	P	R	F	L	V	G	T	Y	P	W	M	T	S	L	T	P	D	G	K	T	L	L	F	Y	Q	F	S	P	A	P	A	V	G	V	V	D	L	E	G	.	.	K	A	F	K	R	M	L	D	V	P	D	C	Y	H	I
Template Known Secondary structure									T	T	T				.	.							T	T							S			G	G	G					T	T	S									S	S	S								T	T	T	.	.	T										S
Template Predicted Secondary structure															.	.																																																	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	.	.	.	.	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G
Query Conservation																																																		.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	P	T	A	P	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	M	H	C	R	D	G	S	L	A	K	V	A	F	G	T	E	G	T	P	E	I	T	H	T	E	V	F	H	P	E	D	E	F	L	I	N	H	P	A	Y	S	Q	K	A	G	R	L	V	W	P	T	Y	T	G	K	I
Template Known Secondary structure						T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S									S	S	S	S										S		T	T	S		B		S						T	T	T	T						B	T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.																.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290								.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.											.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	.	.	.	.	.	.	.	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	.	.	.	.	.	.	.	.	.	.	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I
Query Conservation																					.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		H	Q	I	D	L	S	S	G	D	A	K	F	L	P	A	V	E	A	L	T	E	A	E	R	A	D	G	W	R	P	G	G	W	Q	Q	V	A	Y	H	R	A	L	D	R	I	Y	L	L	V	D	Q	R	D	E	W	R	H	K	T	A	S	R	F	V	V	V	L	D	A	K	T	G	E	R	L	A	K	F	E	.
Template Known Secondary structure							T	T	S	S									S	S							T	T					S	S	S						T	T	T	T											T	T		T	T	S										T	T	T									.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	.	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V	S	P	R	N
Query Conservation																				.
Alig confidence		.	.	.																.
Template Conservation		.	.	.
Template Sequence		.	.	.	M	G	H	E	I	D	S	I	N	V	S	Q	D	E	K	P	L	L	Y	A	L	S	T	G	D	K	T	L	Y	I	H	D	A	E	S
Template Known Secondary structure		.	.	.													S	S	S								T	T	T	T							T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions