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Job DescriptionP75804
Confidence93.86%DateThu Jan 5 12:14:23 GMT 2012
Rank162Aligned Residues262
% Identity12%Templatec2iwkB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: inhibitor-bound form of nitrous oxide reductase from2 achromobacter cycloclastes at 1.7 angstrom resolution
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.... .....50.... .....60.........70.........80.........90.........100....
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Query Sequence  KLDHPWALAFLP. . . DNHGMLITLR. GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY. . . .
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Template Sequence  GDLHHVHMSFTDGKYDGRYLFMNDKANTRVARVRCDVMKTDAILEIP. . . . . NAKGIHGMRPQKW. . . PRSNYVFCNGED
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B

TTTTTTTTTT
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S

S...SB
S
S
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   90.........100.........110.........120.........130...... ...140......... 150.........160.
 
   105....110.........120.........130.........140.........150.........160.... .....170........
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Query Sequence  . . . . . SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL. GENNQRPTAQDLDK
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Template Sequence  EAPLVNDGSTMTDVATYVNIFTAVDADKWEVAWQVKVSG. . . . . . . . . NLDNCDADYEGKWAFSTSYNSEMGMTLEEMTK
Template Known Secondary structure 
B
SS
SSSSTT
GGG
BTTTTSS.........




SSSSS
TT

SST
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   162.......170.........180.........190.........200 .........210.........220.........230..
 
   179180....... ..190.........200..... ....210.........220.........230........
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Query Sequence  LQGKLVRLT. . . . . . . . . . . DQGEIPDDNPFIKESGAR. . . AEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGG. . . . . .
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Template Sequence  SEMDHVVVFNIAEIEKAIKAGQYEEINGVKVVDGRKEAKSLFTRYIPIANNPHGCNMAPDRKHLCVAGKLSPTVTVLDVT
Template Known Secondary structure  SS
T
STT

GGGT
SSSSS



TTSS
TTSSBGG
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   233......240.........250.........260.........270.........280.........290.........300.........310..
 
   239240.........250.........260.........270.........280.........290....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . DEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMA
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Template Sequence  KFDALFYDNAEPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIDEAIRAYAGEKINPIKDKLDVQYQPGHL
Template Known Secondary structure  GS


GGGG

B

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TTSTTTTT





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   313......320.........330.........340.........350.........360.........370.........380.........390..
 
   295....300.........310.
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Query Sequence  FYNSDKFPQWQQKLFIG
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Template Sequence  KTVMGETLDAANDWLVC
Template Known Secondary structure  TTTTSTT

SS
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   393......400.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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