Job Description P75804 Confidence 98.92% Date Thu Jan 5 12:14:23 GMT 2012 Rank 121 Aligned Residues 253 % Identity 13% Template c2ivzD_ PDB info PDB header:protein transport/hydrolase Chain: D: PDB Molecule:protein tolb; PDBTitle: structure of tolb in complex with a peptide of the colicin2 e9 t-domain Resolution 2.0 Å

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		43	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		L	P	D	N	H	G	M	L	.	.	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G
Query Conservation										.	.
Alig confidence										.	.																							.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Sequence		G	A	F	R	T	R	I	A	Y	V	V	Q	T	F	P	Y	E	L	R	V	S	D	Y	D	G	Y	N	Q	F	V	V	H	.	.	.	.	.	.	.	.	.	.	.	R	S	P	Q	P	L	M	S	P	A	W	S	P	D	G	S	K	L	A	Y	V	T	F	E	S	G	.	.	.	.	R	S	A	L	V	I	Q
Template Known Secondary structure				T	T																			T	T	S		S						.	.	.	.	.	.	.	.	.	.	.			S	S									T	T	S	S								T	T	S	.	.	.	.	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.												.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template Sequence		T	L	A	N	G	A	V	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	V	A	S	F	P	R	H	N	G	A	P	A	F	S	P	D	G	S	K	L	A	F	A	L	S	K	T	G	S	L	N	L	Y	V	M	D	L	A	S	G	Q	I	R	Q	V	T	D	G	R	S	N	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T						.	.	.	.	.	.	.	.	.	.	.	.					S	S									T	T	S	S								T	T	S	S								T	T	T										S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.													240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	E	P	T	W	F	P	D	S	Q	N	L	A	F	T	S	D	Q	A	G	R	P	Q	V	Y	K	V	N	I	N	G	G	A	P	Q	R	I	T	W	E	G	S	Q	N	Q	D	A	D	V	S	S	D	G	K	F	M	V	M	V	S	S	Q	H	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S	S								T	T	S	S								T	T										S	S	S									T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.															.	.	.
Query SS confidence																								.	.															.	.	.
Query Sequence		V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	.	.	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	.	.	.	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P
Query Conservation																								.	.															.	.	.
Alig confidence																								.	.															.	.	.													.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		A	K	Q	D	L	A	T	G	G	V	Q	V	L	S	S	T	F	L	D	E	T	P	S	L	A	P	N	G	T	M	V	I	Y	S	S	S	Q	G	M	G	S	V	L	N	L	V	S	T	D	G	R	F	K	.	.	.	.	A	R	L	P	A	T	D	G	Q	V	K	F	P	A	W	S	P
Template Known Secondary structure						T	T	T									S	S	S								T	T	S	S							S	G	G	G	G	T	S						T	T	S				.	.	.	.							S	S
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.					.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions