Job Description P75804 Confidence 100.00% Date Thu Jan 5 12:14:23 GMT 2012 Rank 5 Aligned Residues 314 % Identity 35% Template c2ismA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of the putative oxidoreductase (glucose2 dehydrogenase) (ttha0570) from thermus theromophilus hb8 Resolution 1.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	N	V	E	V	L	Q	D	K	L	D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S
Query Conservation
Alig confidence																																.																		.	.	.
Template Conservation																																.																		.	.	.
Template Sequence		G	L	R	V	E	E	V	V	G	G	L	E	V	P	W	A	L	A	F	L	P	D	G	G	M	L	I	A	E	R	.	P	G	R	I	R	L	F	R	E	G	R	L	S	T	Y	A	E	.	.	.	L	S	V	Y	H	R	G	E	S	G	L	L	G	L	A	L	H	P	R	F	P	Q	E	P	Y	V	Y	A	Y
Template Known Secondary structure													S									T	T	S							T	.	T	T							T	T								.	.	.						S	T	T		S								T	T	T	T	T	S
Template Predicted Secondary structure																																.																		.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	R	T	V	A	E	G	G	L	R	N	Q	V	V	R	L	R	H	L	G	E	R	G	V	L	D	R	V	V	L	D	G	I	P	A	R	P	H	G	L	H	S	G	G	R	I	A	F	G	P	D	G	M	L	Y	V	T	T	G	E	V	Y	E	R	E	L	A	Q	D	L	A	S	L	G	G	K	I
Template Known Secondary structure		.	.	.	.					T	T	S	S											S	S																T	T												T	T	S									T	T		G	G	G	G	G		T	T		S	S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G
Query Conservation
Alig confidence																																																								.																						.	.	.	.
Template Conservation																																																								.																						.	.	.	.
Template Sequence		L	R	L	T	P	E	G	E	P	A	P	G	N	P	F	L	G	R	R	G	A	R	P	E	V	Y	S	L	G	H	R	N	P	Q	G	L	A	W	H	P	K	T	G	E	L	F	S	S	E	H	G	P	G	H	.	D	E	V	N	L	I	V	P	G	G	N	Y	G	W	P	R	V	V	G	R	G	.	.	.	.
Template Known Secondary structure						T	T	S	S	B		T	T		T	T	T	T		T	T	S		T	T							S									T	T	T													.								T	T		B			T	T	T			S			.	.	.	.
Template Predicted Secondary structure																																																								.																						.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	.	.	.	V	T	E	D	G	R	I	L	T	D	R	G	Q
Query Conservation																																																																		.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	D	P	R	Y	R	D	P	L	Y	F	W	P	Q	G	F	P	P	G	N	L	A	F	F	R	.	.	.	.	.	.	.	.	G	D	L	Y	V	A	G	L	R	G	Q	A	L	L	R	L	V	L	E	G	E	R	G	R	W	R	V	L	R	V	E	T	A	L	S	G	F	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.			T	T	S				S				T	T											T	.	.	.	.	.	.	.	.	T							T	T	T	T											T	T													S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
											253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.									.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.										.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G	.	.	.	.	.	.	.	.	.	E	L	L	K	V
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	R	E	V	Q	V	G	P	D	G	A	L	Y	V	T	T	S	N	R	D	G	R	G	Q	V	R	P	G	D	D	R	V	L	R	L
Template Known Secondary structure										T	T	S								S	T	T	T	T	S				T	T		S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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