Job Description P75804 Confidence 97.51% Date Thu Jan 5 12:14:23 GMT 2012 Rank 152 Aligned Residues 269 % Identity 8% Template c2gopB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trilobed protease; PDBTitle: the beta-propeller domain of the trilobed protease from pyrococcus2 furiosus reveals an open velcro topology Resolution 2.00 Å

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		43	.	.	.	.	.	.	50		.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure										.							.	.	.	.	.
Query SS confidence										.							.	.	.	.	.
Query Sequence		L	P	D	N	H	G	M	L	.	I	T	L	R	G	G	.	.	.	.	.	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A
Query Conservation										.							.	.	.	.	.
Alig confidence										.							.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		R	T	K	G	E	L	V	A	Y	V	L	T	K	A	D	N	K	Y	E	N	T	I	V	I	E	N	L	K	N	N	A	R	R	F	I	E	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	P	R	I	S	P	D	G	K	K	I	A	F	M	R	A	N	E	.	.	.	.	E	K	K	V
Template Known Secondary structure					T	T												S										T	T	T								T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	S									T	.	.	.	.	T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	I	W	V	A	D	L	E	T	L	S	S	K	K	I	L	E	.	.	.	.	.	.	.	.	.	.	.	A	K	N	I	R	S	L	E	W	N	E	D	S	R	K	L	L	I	V	G	F	K	D	G	E	K	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F
Template Known Secondary structure									T	T	T									.	.	.	.	.	.	.	.	.	.	.		S									T	T	S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.												.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																							.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	.	.
Query Conservation																																																																																.	.
Alig confidence																							.																																																									.	.
Template Conservation																							.
Template Sequence		W	I	F	D	T	E	S	E	E	V	I	E	E	F	E	K	P	R	F	S	S	.	G	I	W	H	R	D	K	I	V	V	N	V	P	H	R	E	I	I	P	Q	Y	F	K	F	W	D	I	Y	I	W	E	D	G	K	E	E	K	M	F	E	K	V	S	F	Y	A	V	D	S	D	G	E	R	I	L	L	Y	G
Template Known Secondary structure						T	T	T	T										T	T			.					T	T											S	S			S	S										T	T										S								S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
							275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																													.	.	.
Query SS confidence		.	.	.	.	.																													.	.	.
Query Sequence		.	.	.	.	.	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	.	.	.	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R
Query Conservation		.	.	.	.	.																													.	.	.
Alig confidence		.	.	.	.	.																													.	.	.																								.	.	.	.	.															.	.
Template Conservation																																																													.	.	.	.	.															.	.
Template Sequence		K	P	E	K	K	Y	M	S	E	H	N	K	L	Y	I	Y	D	G	K	E	V	M	G	I	L	D	E	V	D	R	G	V	G	Q	A	K	I	K	D	G	K	V	Y	F	T	L	F	E	E	G	S	V	N	L	Y	I	W	D	G	.	.	.	.	.	E	I	K	P	I	A	K	G	R	H	W	I	M	G	.	.
Template Known Secondary structure				T	T		T	T		S								S	S	S					S	S	T	T												T	T									T	T								S	S	.	.	.	.	.	S							S	S	S					.	.
Template Predicted Secondary structure																																																													.	.	.	.	.															.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.						.	.	.	.	.	.	.	300	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.										.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	.	.	.	.	.	.	.	.	.	G	E	L	L	K	V	S	P	R	N
Query Conservation																	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	V	D	E	I	V	V	Y	L	K	E	T	A	T	R	L	R	E	L	F	T	W	D	G	E	E	K	Q	L	T	D	Y	N
Template Known Secondary structure					S	S	S								S	S	S								S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions