Job Description P75804 Confidence 99.31% Date Thu Jan 5 12:14:23 GMT 2012 Rank 79 Aligned Residues 297 % Identity 9% Template c2gnqA_ PDB info PDB header:transcription Chain: A: PDB Molecule:wd-repeat protein 5; PDBTitle: structure of wdr5 Resolution 1.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	T	V	N	V	E	V	L	Q	D	K	L	D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	Y	A	L	K	F	T	L	A	G	H	T	K	A	V	S	S	V	K	F	S	P	N	G	E	W	L	A	S	S	S	A	D	K	L	I	K	I	W	G	A	Y	D	G	K	F	E	K	T	I	S	.	.	.	.	.	.	.	.	.	.	G	H	K	L	G	I	S	D	V	A	W	S	S	D	S	N	L	L
Template Known Secondary structure														S	S									T	T	S	S							T	T	S							T	T	T									.	.	.	.	.	.	.	.	.	.			S	S									T	T	S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.											.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	A	S	D	D	K	T	L	K	I	W	D	V	S	S	G	K	C	L	K	T	L	K	G	H	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	F	C	C	N	F	N	P	Q	S	N	L	I	V	S	G	S	F	D	E	S	V	R	I	W	D	V	K	T	G	K	C	L
Template Known Secondary structure						T	T	S							T	T	T											S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S	S	S							T	T	S							T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y
Query Conservation
Alig confidence												.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		K	T	L	P	A	H	S	D	P	V	.	.	.	.	.	S	A	V	H	F	N	R	D	G	S	L	I	V	S	S	S	Y	D	G	L	C	R	I	W	D	T	A	S	G	Q	C	L	K	T	L	I	D	D	D	N	P	P	V	S	F	V	K	F	S	P	N	G	K	Y	I	L	A	A	T	L	D	N	T	L	K
Template Known Secondary structure								S	S			.	.	.	.	.							T	T	S	S							T	T	S							T	T	T										S	S											T	T	S	S							T	T	T
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		L	W	D	Y	S	K	G	K	C	L	K	T	Y	T	G	H	K	N	E	K	Y	C	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	A	N	F	S	V	T	G	G	K	W	I	V	S	G	S	E	D	N	L	V	Y	I	W	N	L	Q	T	K	E	I	V	.	.	.	Q	K	L	Q	G	H	T	D	V
Template Known Secondary structure					T	T	T	T								S	S			S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	S								T	T	S							T	T	T					.	.	.							S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.														.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.				.	360	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	.	.	.	E	S	S	G	E	L	L	K	V
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		V	I	S	T	A	C	H	P	T	E	N	I	I	A	S	A	A	L	E	N	D	K	T	I	K	L	W	K	S
Template Known Secondary structure									S	S	S	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions