Phyre 2 alignment of P75804 with c2fp8A

Job Description P75804
Confidence 99.59% Date Thu Jan 5 12:14:23 GMT 2012

Rank 33 Aligned Residues 283

% Identity 13% Template c2fp8A_

PDB info PDB header:lyase Chain: A: PDB Molecule:strictosidine synthase; PDBTitle: structure of strictosidine synthase, the biosynthetic entry to the2 monoterpenoid indole alkaloid family

Resolution 2.30 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	28	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence	E	V	L	Q	D	K	.	L	D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence	E	I	L	I	E	A	P	S	Y	A	P	N	S	F	T	F	D	S	T	N	K	G	F	Y	T	S	V	Q	D	G	R	V	I	K	Y	E	G	P	N	S	G	F	V	D	F	A	Y	A	S	P	Y	W	N	K	A	F	C	E	N	S	T	D	A	E	K	R	P	L	C	G	R	T	Y	D	I	S	Y	N	L	Q
Template Known Secondary structure							S	S	S									T	T		S	S						T	T	S								T	T	T								S		T	T							T	T				G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
	33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

	107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence	V	G	D	D	G	K	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	.	.	.	.	.	K	L	Q	G
Query Conservation																																																																								.	.	.	.	.
Alig confidence																									.	.	.	.	.																																											.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence	N	N	Q	L	Y	I	V	D	C	Y	Y	H	L	S	V	V	G	S	E	G	G	H	A	T	.	.	.	.	.	Q	L	A	T	S	V	D	G	V	P	F	K	W	L	Y	A	V	T	V	D	Q	R	T	G	I	V	Y	F	T	D	V	S	T	L	Y	D	D	R	G	V	Q	Q	I	M	D	T	S	D	K	T	G
Template Known Secondary structure	T	T							T	T	T							T	T						.	.	.	.	.				S			T	T				S									T	T	T								S		S	S			T	T									T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
	113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

	182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	R	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	D	P	S	T	K	E	T	T	L	L	L	K	E	L	H	V	P	G	G	A	E	V	S	A	D	S	S	F	V	L	V	A	E	F	L	S	H	Q	I	V	K	Y	W	L	E	G	P	K	K	G	T	A	E	V	L	V	K	I	P	N	P	G
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T										S									T	T	S	S							G	G	G	T							S	S	S	T	T	T	T									S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	188	.	190														.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

	262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.											.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	.	.	.	.	.	.	.	.	.	.	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.												.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence	N	I	K	R	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	H	F	W	V	S	S	S	E	E	L	D	G	N	M	H	G	R	V	D	P	K	G	I	K	F	D	.	E	F	G	N	I	L	E	V
Template Known Secondary structure						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S										T	T	S	S	T	T	S											.	T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
	255	.	.	.	.	260																																						.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.

	332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V
Query Conservation
Alig confidence																															.
Template Conservation																															.
Template Sequence	I	P	L	P	P	P	F	A	G	E	H	F	E	Q	I	Q	E	H	D	G	L	L	Y	I	G	T	L	F	H	G	.	S	V	G	I	L
Template Known Secondary structure					T	T	T	T	T	S									T	T							S	S		S	.
Template Predicted Secondary structure																															.
Template SS confidence
	297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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