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Job DescriptionP75804
Confidence97.89%DateThu Jan 5 12:14:23 GMT 2012
Rank146Aligned Residues300
% Identity13%Templatec2ecfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50...... ...60.........70.........80.........90.........100.........
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Query Sequence  HPWALAFLPDNHGMLITLRGG. . . . . . ELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD
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Template Sequence  TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKV. . . . . . VLAMTGIVDYQWSPDAQRLLFPLG. . .
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   38.40.........50.........60.........70.........80.... .....90.........100........
 
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Query Sequence  DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ
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Template Sequence  . . . . . GELYLYDLKQEGKAAVRQL. . . . . . . . . THGEGFATDAKLSPKGGFVSFIRGR. . . . NLWVIDLASGRQMQLTAD
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Query Sequence  GEIPDDNPFIKESGARAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEA
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Template Sequence  GSTTIGN. . . . . . GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK
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   191...... ..200.........210.........220.........230.........240.........250.........260....
 
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Query Sequence  KGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIG. . . . ALKDKDVIVMSVNGDKVTEDGRILTDRGQRIR. D
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Template Sequence  LGVISPAEQAQTQWIDLGKEQDIYLARVNWRD. . . PQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS
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   265....270.........280.........290...... ...300.........310.........320.........330.........340.
 
   345....350.........360.........370.
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Query Sequence  VRTGPDGYLYVLTDESSGELLKVSPRN
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Template Sequence  LRFLDDGSILWSSERTGFQHLYRIDSK
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   342.......350.........360........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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