Job Description P75804 Confidence 47.99% Date Thu Jan 5 12:14:23 GMT 2012 Rank 178 Aligned Residues 258 % Identity 14% Template c1yr2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity Resolution 1.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	R	G	G	.	.	.	.	.	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K	A
Query Conservation																				.	.	.	.	.
Alig confidence																				.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		A	W	A	A	S	D	D	G	R	L	L	A	Y	S	V	Q	D	G	G	S	D	W	R	T	V	K	F	V	G	V	A	D	G	K	P	L	A	D	E	L	K	W	V	K	F	S	.	.	.	.	.	.	.	.	.	.	.	G	L	A	W	L	G	N	D	A	L	L	Y	S	R	F	A	E	P	L	N	Y	N	.
Template Known Secondary structure							T	T	S	S									T	T		S									T	T	T													S		.	.	.	.	.	.	.	.	.	.	.					S	T	T	S															.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.												.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P
Query Conservation
Alig confidence		.																.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation		.																.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Sequence		.	Q	T	V	W	L	H	R	L	G	T	P	Q	S	A	D	.	.	.	.	.	.	.	Q	P	V	F	A	T	P	E	L	P	K	R	G	H	G	A	S	V	S	S	D	G	R	W	V	V	I	T	S	S	E	G	T	D	P	V	N	T	V	.	.	.	.	.	.	.	H	V	A	R	V	T	N	G	K	I	G
Template Known Secondary structure		.								T	T	S		G	G	G		.	.	.	.	.	.	.							T	T		T	T									T	T	S										T	T		S					.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure		.																.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template SS confidence
			243	.	.	.	.	.	.	250	.	.	.	.	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	.	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E
Query Conservation																													.
Alig confidence																													.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	T	A	L	I	P	D	L	K	A	Q	W	D	F	V	D	G	V	G	D	Q	L	W	F	V	S	G	D	G	A	P	L	K	K	I	V	R	V	D	L	S	G	S	T	P	R	F	D	T	V	V	P	E	S	K	D	N	L	E	S	V	G	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	S	S									T	T								T	T		T	T									S	S	S	S											S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	R	L	F	A	S	Y	I	H	D	A	K	S	Q	V	L	A	F	D	L	D	G	K	P	A	G	A	V	S	L	P	G	I	G	S	.	A	S	G	L	S	G	R	P	G	D	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T									T	T									T	T	S							B		S	S	S			.								B	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
																																		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		L	Y	V	L	T	D	E	S	S	.	.	.	G	E	L	L	K	V	S	P	R	N
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		H	A	Y	L	S	F	S	S	F	T	Q	P	A	T	V	L	A	L	D	P	A	T
Template Known Secondary structure										T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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