Phyre 2 alignment of P75804 with c1k32E

Job Description P75804
Confidence 99.38% Date Thu Jan 5 12:14:23 GMT 2012

Rank 63 Aligned Residues 285

% Identity 12% Template c1k32E_

PDB info PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: crystal structure of the tricorn protease

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence	D	H	P	W	A	L	A	F	L	P	D	N	H	G	M	L	I	T	L	.	.	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	D	V	W	A	H	G	Q	G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	I	W	L	S	Y	S	E	V	G	D	D	G	K
Query Conservation																				.	.
Alig confidence																				.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence	L	R	I	R	Y	V	R	R	G	G	D	T	K	V	A	F	I	H	G	T	R	E	G	D	F	L	G	I	Y	D	Y	R	T	G	K	A	E	K	F	E	.	.	.	.	.	.	.	.	.	.	.	E	N	L	G	N	V	F	A	M	G	V	D	R	N	G	K	F	A	V	V	A	N	D	R	F	E	I	M	T
Template Known Secondary structure	S									S	S	S									S	S									T	T	T								.	.	.	.	.	.	.	.	.	.	.					S								T	T	S	S							T	T	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.												.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

	113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	G	T	A	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G	Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	V	D	L	E	T	G	K	P	T	V	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	R	E	A	M	I	T	D	F	T	I	S	D	N	S	R	F	I	A	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	L	K	H	G	E	T	D	G	Y	V
Template Known Secondary structure			T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S									T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	T	T		S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	431	.	.	.	.	.	.	.	.	440	.	.																			.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.																	.	.	.	.	.	470	.	.	.	.	.	.

	193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G	D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence	M	Q	A	I	H	V	Y	D	M	E	G	R	K	I	F	A	A	T	T	E	N	S	H	D	Y	A	P	A	F	D	A	D	S	K	N	L	Y	Y	L	S	Y	R	S	L	D	P	S	P	D	R	V	V	L	N	F	S	F	E	V	V	S	K	P	F	V	I	P	L	I	P	G	S	P	N	P	T	K	L	V	P
Template Known Secondary structure									T	T	T	T						S		S	S	S	B								T	T	S	S							S									S	S	S	S						S		B							S	S	T	T				G	G	G
Template Predicted Secondary structure
Template SS confidence
	477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.

	273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	S	G	M	A	F	Y	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	I	G	A	L	K	D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Template Conservation																																																																																.
Template Sequence	R	S	M	T	S	E	A	G	E	Y	D	L	N	D	M	Y	K	R	S	S	P	I	N	V	D	P	G	D	Y	R	M	I	I	P	L	E	S	S	I	L	I	Y	S	V	P	V	H	G	E	F	A	A	Y	Y	Q	G	A	P	E	K	G	V	L	L	K	Y	D	V	K	T	R	K	V	T	E	V	K	N	N	.
Template Known Secondary structure	G	G	G	S									T	T	G	G	G	G					S				B									S	S												S																			T	T	T	T									.
Template Predicted Secondary structure																																																																																.
Template SS confidence
	557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.

	336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	Y	.	L	Y	V	L	T	D	E	S	S	G	E	L	L	K	V	S	P	R	N
Query Conservation																		.
Alig confidence	.	.	.	.	.	.												.
Template Conservation	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	L	T	D	L	R	L	S	A	D	R	K	T	V	M	V	R	K	D	D	G	K	I	Y	T	F	P	L	E	K	P	E
Template Known Secondary structure	.	.	.	.	.	.								T	T	S								T	T	S							T	T		T	T
Template Predicted Secondary structure	.	.	.	.	.	.
Template SS confidence
							636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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