Job Description P75804 Confidence 99.25% Date Thu Jan 5 12:14:23 GMT 2012 Rank 84 Aligned Residues 293 % Identity 9% Template c1fwxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from p. denitrificans Resolution 1.60 Å

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		41	.	.	.				.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																																			.	.	.	.	80	.	.
Predicted Secondary structure						.	.	.				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	L	P	.	.	.	D	N	H	.	G	M	L	I	T	L	R	G	G	E	L	R	H	W	Q	A	G	K	G	L	S	A	P	L	S	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	W	A	H	G	Q
Query Conservation						.	.	.				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	A	P	G	Q	L	D	D	Y	Y	G	F	W	S	S	G	Q	S	G	E	M	R	I	L	G	I	P	S	M	R	E	L	M	R	V	P	V	F	N	R	C	S	A	T	G	W	G	Q	T	N	E	S	V	R	I	H	E	R	T	M	S	E	R	T	K	K	F	L	A	A	N	G	K	R	I	H	D	N	G
Template Known Secondary structure					T	T				S								B	T	T									T	T									S	S	S			T	T	T		T	T	T	B									T	T												T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																		.	.	.
Query SS confidence																			.																		.	.	.
Query Sequence		G	G	L	L	D	V	V	L	A	P	D	F	A	Q	S	R	R	.	I	W	L	S	Y	S	E	V	G	D	D	G	K	A	G	T	A	.	.	.	V	G	Y	G	R	L	S	D	D	L	S	K	V	T	D	F	R	T	V	F	R	Q	M	P	K	L	S	T	G	N	H	F	G	G	R	L	V	F	D	G	K	G
Query Conservation																			.																		.	.	.
Alig confidence																			.																		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	H	H	V	H	M	S	F	T	E	G	K	Y	D	G	R	F	L	F	M	N	D	K	A	N	T	R	V	A	R	V	R	C	D	V	M	K	C	D	A	I	L	E	I	P	N	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	H	G	L	R	P	Q	K	W	P
Template Known Secondary structure			B									T	T												T	T	T	T							T	T	T	T									S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																					.	.	.	.	130	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	F	I	A	L	G	E	N	N	Q	R	P	T	A	Q	D	L	D	K	L	Q	G	K	L	V	R	L	T	D	Q	G	E	I	P	D	D	N	P	F	I	K	E	S	G	A	R	A	E	I	W	S	Y	G	I	R	N	P	Q	G	M	A	M	N	P	W	S	N	A	L	W	L	N	E	H	G	P	R	G	G
Query Conservation
Alig confidence																								.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		R	S	N	Y	V	F	C	N	G	E	D	E	T	P	L	V	N	D	G	T	N	M	.	.	.	.	.	.	E	D	V	A	N	Y	V	N	V	F	T	A	V	D	A	D	K	W	E	V	A	W	Q	V	L	V	S	G	N	L	D	N	C	D	A	D	Y	E	G	K	W	A	F	S	T	S	Y	N	S	E	K	G
Template Known Secondary structure		B		S								S				S	S		S	S	S	S	T	.	.	.	.	.	.	T		G	G	G										T	T	T	T									S	S									S	S	S	S							S		T	T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.
Predicted Secondary structure																																																												.	.	.														.
Query SS confidence																																																												.	.	.														.
Query Sequence		D	E	I	N	I	P	Q	K	G	K	N	Y	G	W	P	L	A	T	W	G	I	N	Y	S	G	F	K	I	P	E	A	K	G	E	I	V	A	G	T	E	Q	P	V	F	Y	W	K	D	S	P	A	V	S	G	M	A	F	Y	.	.	.	N	S	D	K	F	P	Q	W	Q	Q	K	L	F	.	I	G	A	L	K
Query Conservation																																																												.	.	.														.
Alig confidence													.	.																																														.	.	.														.
Template Conservation													.	.
Template Sequence		M	T	L	P	E	M	T	A	A	E	M	.	.	D	H	I	V	V	F	N	I	A	E	I	E	K	A	I	A	A	G	D	Y	Q	E	L	N	G	V	K	V	V	D	G	R	K	E	A	S	S	L	F	T	R	Y	I	P	I	A	N	N	P	H	G	C	N	M	A	P	D	K	K	H	L	C	V	A	G	K	L
Template Known Secondary structure		S	S					T		S	S		.	.																	T	T		S				T	T							S	G	G	G			S	S								S	S								T	T	S	S							T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		D	K	D	V	I	V	M	S	V	N	G	D	K	V	T	E	D	G	R	I	L	T	D	R	G	Q	R	I	R	D	V	R	T	G	P	D	G	.	.	Y	L	Y	V	L	T	D	E	S	S	G	E	L	L	K
Query Conservation																																							.	.
Alig confidence																	.	.	.	.	.																		.	.
Template Conservation																	.	.	.	.	.
Template Sequence		S	P	T	V	T	V	L	D	V	T	R	F	D	A	V	.	.	.	.	.	F	Y	E	N	A	D	P	R	S	A	V	V	A	E	P	E	L	G	L	G	P	L	H	T	A	F	D	G	R	G	N	A	Y	T
Template Known Secondary structure		S	S	B						G	G	G					.	.	.	.	.			S				G	G	G	G						B			S									T	T	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions