 |
Job Description | P67701 | Confidence | 21.81% | Date | Thu Jan 5 12:10:49 GMT 2012 |
Rank | 228 | Aligned Residues | 22 |
% Identity | 9% | Template | d1ku7a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma4 domain
|
Resolution | 2.40 |
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | |
|
. | . | . | . | . | . | . | . | 110 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  | . | . |  |
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | L | T | L | S | D | L | P | E | I | . |
. |
G | S | K | S | M | V | S | R | V | L | S |
Query Conservation |   |
  |
|
|
|
|   |
|
|
|
|
| . | . |   |
|   |
|   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |   |   |
Template Sequence |   |
R | E | H | T | L | E | E | V | G | A | Y | F | G | V | T | R | E | R | I | R | Q | I | E | N |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
394 | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|