Job Description P67701 Confidence 33.89% Date Thu Jan 5 12:10:49 GMT 2012 Rank 191 Aligned Residues 49 % Identity 24% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.																	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	Q	Y	G	L	T	L	S	D	L	P	E	I	.	.	G	S	K	S	M	V	S	R	V	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	R	K	L	T	L	E	H	A	K	K	L	A	T	R	F	G	I	S	P	A	L	F
Query Conservation																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	H	Q	G	V	R	P	C	D	I	S	R	Q	L	R	V	S	H	G	C	V	S	K	I	L	G	R	Y	Y	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	K	V	A	T	P	K	V	V	E	K	I	G	D	Y	K	R	Q	N	P	T	M	F
Template Known Secondary structure						T											T			S										S	S	T	T	S																	T	T													S	S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions