 |
Job Description | P67701 | Confidence | 98.85% | Date | Thu Jan 5 12:10:49 GMT 2012 |
Rank | 46 | Aligned Residues | 56 |
% Identity | 16% | Template | c2jvlA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:trmbf1; |
PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei
|
Resolution | UNK |
|
  |   |
82 | . | . | . | . | . | . | . | 90 | |
|
. | . | . | . | . | . | . | . | . | 100 | |
. | . | |
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  | . |  |  | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | I | R | T | L | M | D | Q | . |
. |
Y | G | L | T | L | S | D | L | P | E | . |
I | G | . |
S | K | S | M | V | S | R | V | L | S | G | K | R | K | L | T | L | E | H | A | K | K | L | A | T | R | F | G | I | S | P | A | L | F | I |
Query Conservation |   |
|   |
|
|   |
|
|
|   | . | . |   |
|
|
|
|   |
|
|
|
| . |
|   | . |
|   |
|   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|   |
|   |   |   |   |
Template Sequence |   |
K | A | I | E | Q | G | R | Q | K | F | E | P | T | M | T | Q | A | E | L | G | K | E | I | G | E | T | A | A | T | V | A | S | Y | E | R | G | T | A | T | P | D | Q | N | I | L | S | K | M | E | R | V | L | N | V | K | L | R | G | A | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | S | S | S |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  | T | T | T |
| S |
|
|
|  |  |  |  |  |  |  |  |  | T | T | T |
| B | S | S | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|