Job Description P0AAP5 Confidence 99.12% Date Thu Jan 5 11:13:26 GMT 2012 Rank 54 Aligned Residues 65 % Identity 18% Template d2oz6a1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	W	N	E	E	L	R	.	.	.	.	.	S	R	I	G	V	M	N	Y	I	H	Q	R	T	R	I	S	R	S	V	V	A	E	V	L	A	A	L	R	K	G	G	Y	I	E	M	N	K	G	K	L	V	A	I	N
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		D	V	T	G	R	V	A	R	T	L	L	D	L	C	Q	Q	P	D	A	M	T	H	P	D	G	M	Q	I	K	I	T	R	Q	E	I	G	R	I	V	G	C	S	R	E	M	V	G	R	V	L	K	S	L	E	E	Q	G	L	V	H	V	K	G	K	T	M	V	V	F	G
Template Known Secondary structure															T	T	S	T	T					T	T																T	S															T	T	S					T	T						T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions