Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAP5
Confidence55.46%DateThu Jan 5 11:13:26 GMT 2012
Rank406Aligned Residues35
% Identity11%Templated2hoea1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.46

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190....
Predicted Secondary structure 









Query SS confidence 


































Query Sequence  IGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNK
Query Conservation    
   

   
 

  
 
 
  
   
 
   
Alig confidence 


































Template Conservation 





 













  
 





 


Template Sequence  PVSRVELAEELGLTKTTVGEIAKIFLEKGIVVEEK
Template Known Secondary structure 
B
T

TS
Template Predicted Secondary structure 









Template SS confidence 


































   21........30.........40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions