Job Description P0AAP5 Confidence 94.43% Date Thu Jan 5 11:13:26 GMT 2012 Rank 179 Aligned Residues 111 % Identity 13% Template d2bgca2 SCOP info Double-stranded beta-helix cAMP-binding domain-like Listeriolysin regulatory protein PrfA, N-terminal domain Resolution 2.3

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.																														.	.
Query SS confidence																																								.	.	.	.																														.	.
Query Sequence		T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	.	.	.	.	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E	.	.	G	N	C	T	G	Y	H
Query Conservation																																								.	.	.	.																														.	.
Alig confidence											.																													.	.	.	.																														.	.
Template Conservation											.
Template Sequence		K	P	K	Q	F	H	K	K	E	.	L	I	F	N	Q	W	D	P	Q	E	Y	C	I	F	L	Y	D	G	I	T	K	L	T	S	I	S	E	N	G	T	I	M	N	L	Q	Y	Y	K	G	A	F	V	I	M	S	G	F	I	D	T	E	T	S	V	G	Y	Y	N	L	E	V	I	S	E	Q	A	T	A	Y	V
Template Known Secondary structure								T	T		.					T	T												S									T	T	S										S	S					S	B		T	T	T			B	S									S	S
Template Predicted Secondary structure											.
Template SS confidence
		18	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q	.	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		I	K	I	N	E	L	K	E	L	L	S	K	N	L	T	H	F	F	Y	V	F	Q	T	L	Q	K	Q	V	S	Y	S	L	A	K	F	N	D	F	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions