 |
Job Description | P0AAP5 | Confidence | 55.55% | Date | Thu Jan 5 11:13:26 GMT 2012 |
Rank | 405 | Aligned Residues | 47 |
% Identity | 11% | Template | d1zara1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Rio2 serine protein kinase N-terminal domain
|
Resolution | 1.75 |
|
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | W | N | E | E | L | R | S | R | I | G | V | M | N | Y | I | H | Q | R | T | R | I | S | R | S | V | V | A | E | V | L | A | A | L | R | K | G | G | Y | I | E | M | N | K | G | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
Template Sequence |   |
A | I | F | K | N | L | W | D | Y | E | Y | V | P | L | Q | L | I | S | S | H | A | R | I | G | E | E | K | A | R | N | I | L | K | Y | L | S | D | L | R | V | V | Q | N | R | Q | K | D |
Template Known Secondary structure |   |
 |  |  | T | T | T | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|