Job Description P0AAP5 Confidence 63.60% Date Thu Jan 5 11:13:26 GMT 2012 Rank 355 Aligned Residues 87 % Identity 9% Template d1vola2 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.70

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	W	N	E	E	L	R	S	R	I	G	V	M	N	Y	I	H	Q	R	T	R	I	S	R	S	V
Query Conservation
Alig confidence																																																															.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		I	T	T	G	D	F	M	S	R	F	C	S	N	L	C	L	P	K	Q	V	Q	M	A	A	T	H	I	A	R	K	A	V	E	L	D	L	V	P	G	R	S	P	I	S	V	A	A	A	A	I	Y	M	A	S	Q	A	S	A	E	K	R	.	.	.	.	T	Q	K	E	I	G	D	I	A	G	V	A	D	V	T
Template Known Secondary structure				G	G	G	T									T																			T	T		S	T	T																	T	S	S	S			.	.	.	.										T
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	V	L	A	A	L	R	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	Q	S	Y	R	L	I	Y	P	R
Template Known Secondary structure										G	G	G
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions