Job Description P0AAP5 Confidence 41.60% Date Thu Jan 5 11:13:26 GMT 2012 Rank 478 Aligned Residues 90 % Identity 16% Template d1vola1 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.70

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Q	T	I	T	L	I	E	Q	N	Q	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	W	N	E	E	L	R	S	R	I	G	V	M	N	Y	I	H	Q	R	T	R	I	S	R	S	V	V	A
Query Conservation
Alig confidence															.																																														.	.	.	.
Template Conservation															.																																														.	.	.	.
Template Sequence		F	K	E	I	T	T	M	A	D	R	I	N	L	.	P	R	N	K	V	D	R	T	N	N	L	F	R	Q	A	Y	E	Q	K	S	L	K	G	R	A	N	D	A	I	A	S	A	C	L	Y	I	A	C	R	Q	E	G	V	P	R	.	.	.	.	T	F	K	E	I	C	A	V	S	R	I	S	K	K	E	I	G
Template Known Secondary structure												T	T		.																		T				T	T	S																	T	T				.	.	.	.							T	T	T		S
Template Predicted Secondary structure															.																																														.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	A	A	L	R	K	G	G	Y	I	E	M	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	C	F	K	L	I	L	K	A	L	E	T	S	V	D
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions