Job Description P0AAP5 Confidence 47.06% Date Thu Jan 5 11:13:26 GMT 2012 Rank 447 Aligned Residues 74 % Identity 19% Template d1fnna1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Helicase DNA-binding domain Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																	.	.	.	.	.														.	.	.																	.
Query SS confidence																																	.	.	.	.	.														.	.	.																	.
Query Sequence		V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	W	N	E	E	L	R	S	R	I	G	.	.	.	.	.	V	M	N	Y	I	H	Q	R	T	R	I	S	R	.	.	.	S	V	V	A	E	V	L	A	A	L	R	K	G	G	Y	I	.	E	M	N	K	G	K	L	V	A	I	N
Query Conservation																																	.	.	.	.	.														.	.	.																	.
Alig confidence																																	.	.	.	.	.														.	.	.																	.
Template Conservation
Template Sequence		E	V	L	I	G	L	P	L	H	E	K	L	F	L	L	A	I	V	R	S	L	K	I	S	H	T	P	Y	I	T	F	G	D	A	E	E	S	Y	K	I	V	C	E	E	Y	G	E	R	P	R	V	H	S	Q	L	W	S	Y	L	N	D	L	R	E	K	G	I	V	E	T	R	Q	N	T	T	L	I	S	I	G
Template Known Secondary structure							S																				S	S																		T	T																			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		202	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	P
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		369	370	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions