Job Description P0AAP5 Confidence 65.23% Date Thu Jan 5 11:13:26 GMT 2012 Rank 346 Aligned Residues 84 % Identity 14% Template d1aisb2 SCOP info Cyclin-like Cyclin-like Transcription factor IIB (TFIIB), core domain Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	K	Q	T	I	T	L	I	E	Q	N	Q	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	W	N	E	E	L	R	S	R	I	G	V	M	N	Y	I	H	Q	R	T	R	I	S	R	S	V	V
Query Conservation
Alig confidence																							.																																							.	.	.	.
Template Conservation																							.																																							.	.	.	.
Template Sequence		P	T	D	Y	V	N	K	F	A	D	E	L	G	L	S	E	K	V	R	R	R	.	A	I	E	I	L	D	E	A	Y	K	R	G	L	T	S	G	K	S	P	A	G	L	V	A	A	A	L	Y	I	A	S	L	L	E	G	E	K	R	.	.	.	.	T	Q	R	E	V	A	E	V	A	R	V	T	E	V	T	V
Template Known Secondary structure		G	G	G	G									T									.											T	T			T	T	S																	T	T				.	.	.	.										T
Template Predicted Secondary structure																							.																																							.	.	.	.
Template SS confidence
		1208	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.		.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.					.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.
		178	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	V	L	A	A	L	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	R	Y	K	E	L	V	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1283	.	.	.	.	.	.	1290	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions