Job Description P0AAP5 Confidence 99.29% Date Thu Jan 5 11:13:26 GMT 2012 Rank 41 Aligned Residues 112 % Identity 15% Template c3otfA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium/sodium hyperpolarization-activated cyclic PDBTitle: structural basis for the camp-dependent gating in human hcn4 channel Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	D	K	C	L	S	R	Y	G	T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E	G	N
Query Conservation
Alig confidence																						.																														.
Template Conservation																						.																														.
Template Sequence		P	N	F	V	T	S	M	L	T	K	L	R	F	E	V	F	Q	P	G	D	.	Y	I	I	R	E	G	T	I	G	K	K	M	Y	F	I	Q	H	G	V	V	S	V	L	T	K	G	N	K	E	.	T	K	L	A	D	G	S	Y	F	G	E	I	C	L	L	T	R	G	R	R	T	A	S	V	R	A	D	T	Y
Template Known Secondary structure										T	T								T	T		.					T	T	S																		S	S	S			.					T	T												S			S	S					S	S
Template Predicted Secondary structure																						.																														.
Template SS confidence
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620		.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	G	Y	H	L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	R	L	Y	S	L	S	V	D	N	F	N	E	V	L	E	E	Y	P	M	M	R	R	A	F	E	T	V	A	L	D	R	L	D
Template Known Secondary structure																				G	G	G
Template Predicted Secondary structure
Template SS confidence
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions