Job Description P0AAP5 Confidence 99.41% Date Thu Jan 5 11:13:26 GMT 2012 Rank 31 Aligned Residues 111 % Identity 14% Template c3mdpA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:cyclic nucleotide-binding domain (cnmp-bd) protein; PDBTitle: crystal structure of a putative cyclic nucleotide-binding protein2 (gmet_1532) from geobacter metallireducens gs-15 at 1.90 a resolution Resolution 1.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	D	K	C	L	S	R	Y	G	T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E	G	N
Query Conservation
Alig confidence																						.																									.	.
Template Conservation																						.																									.	.
Template Sequence		D	E	Q	L	K	D	I	A	L	I	S	E	E	K	S	F	P	T	G	S	.	V	I	F	K	E	N	S	K	A	D	N	L	X	L	L	L	E	G	G	V	E	L	F	Y	.	.	S	S	T	V	C	S	V	V	P	G	A	I	F	G	V	S	S	L	I	K	P	Y	H	Y	T	S	S	A	R	A	T	K	P
Template Known Secondary structure											T								T	T		.					T	T	S	B										S							.	.									T	T					G	G	G	S	S	T	T		B		S	S					S	S
Template Predicted Secondary structure																						.																									.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		C	T	G	Y	H	L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q	.	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		V	R	V	V	D	I	N	G	A	R	L	R	E	X	S	E	N	N	Q	A	L	G	Q	V	L	X	N	N	V	A	A	A	V	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions