 |
Job Description | P0AAP5 | Confidence | 58.76% | Date | Thu Jan 5 11:13:26 GMT 2012 |
Rank | 382 | Aligned Residues | 44 |
% Identity | 25% | Template | c3majA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:dna processing chain a; |
PDBTitle: crystal structure of putative dna processing protein dpra from2 rhodopseudomonas palustris cga009
|
Resolution | 2.05 Å |
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | R | I | G | V | M | N | Y | I | H | Q | R | T | R | I | S | R | S | V | V | A | E | V | L | A | A | L | R | K | G | G | Y | I | E | M | N | K | G | K | L | V | A | I |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |
|   |   |
|   |
|
Template Sequence |   |
G | P | S | P | V | G | I | D | D | L | I | R | L | S | G | I | S | P | A | V | V | R | T | I | L | L | E | L | E | L | A | G | R | L | E | R | H | G | G | S | L | V | S | L |
Template Known Secondary structure |   |
| S | S |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
| T | T | S |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|