Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAP5
Confidence41.81%DateThu Jan 5 11:13:26 GMT 2012
Rank476Aligned Residues39
% Identity13%Templatec3gbgA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170.........180...
Predicted Secondary structure 











Query SS confidence 






































Query Sequence  TLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAA
Query Conservation   
  
            
   

   
 

  
 
 
  
Alig confidence 






































Template Conservation         

        

  

    

   
 
 

 
Template Sequence  AMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES
Template Known Secondary structure  TTTS


T

T
Template Predicted Secondary structure 









Template SS confidence 






































   170.........180.........190.........200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions