Job Description P0AAP5 Confidence 95.08% Date Thu Jan 5 11:13:26 GMT 2012 Rank 163 Aligned Residues 89 % Identity 13% Template c3eqxB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:fic domain containing transcriptional regulator; PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		99	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		A	K	Q	T	I	T	L	I	E	Q	N	Q	.	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	W	N	E	E	L	R	S	R	I	G	V	M	N	Y	I	H	Q	R	T	R	I	S	R	S	V	V
Query Conservation														.
Alig confidence														.																																							.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.
Template Sequence		I	I	F	I	L	N	A	V	E	Q	T	A	K	W	T	T	H	K	I	A	A	A	R	E	L	I	A	H	T	T	E	Y	V	R	Q	Q	L	P	K	I	Y	S	H	E	L	V	Q	V	I	F	E	.	.	.	.	.	.	.	.	.	Q	P	Y	C	R	I	Q	N	L	V	E	S	G	L	A	K	R	Q	T	A
Template Known Secondary structure																																							T	T	T												.	.	.	.	.	.	.	.	.		S										T	T	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.										.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		A	E	V	L	A	A	L	R	K	G	G	Y	I	.	E	M	N	K	G	K
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		S	V	Y	L	K	Q	L	C	D	I	G	V	L	E	E	V	Q	S	G	K
Template Known Secondary structure											T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions