Job Description P0AAP5 Confidence 93.00% Date Thu Jan 5 11:13:26 GMT 2012 Rank 199 Aligned Residues 82 % Identity 12% Template c3ecoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:mepr; PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	W	N	E	E	L	R	S	R	I	G	V	M	N	Y	I	H	Q	R	T	R	I	S	R	S	V	V	A	E	V	L	A	A	L	R	K	G	G	Y	I	E
Query Conservation
Alig confidence																					.	.																										.	.	.	.
Template Conservation																					.	.																										.	.	.	.
Template Sequence		Y	S	Y	L	F	R	M	I	S	H	E	M	K	Q	K	A	D	Q	K	.	.	L	E	Q	F	D	I	T	N	E	Q	G	H	T	L	G	Y	L	Y	A	H	Q	Q	D	G	L	.	.	.	.	T	Q	N	D	I	A	K	A	L	Q	R	T	G	P	T	V	S	N	L	L	R	N	L	E	R	K	K	L	I	Y
Template Known Secondary structure																					.	.		G	G	G	T															S		T	T		B	.	.	.	.										T															T	T	T	S
Template Predicted Secondary structure																					.	.																										.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	K	G	K	L	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	V	K	N	I	G	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions