Job Description P0AAP5 Confidence 99.92% Date Thu Jan 5 11:13:26 GMT 2012 Rank 7 Aligned Residues 189 % Identity 14% Template c3e97A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family; PDBTitle: crystal structure of transcriptional regulator of crp/fnr2 family (yp_604437.1) from deinococcus geothermalis dsm3 11300 at 1.86 a resolution Resolution 1.86 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		G	K	L	D	K	C	L	S	R	Y	G	T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	.	.	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E
Query Conservation																																																			.	.
Alig confidence																						.																													.	.
Template Conservation																						.
Template Sequence		E	D	A	X	R	E	A	L	K	V	V	T	E	R	N	F	Q	P	D	E	.	L	V	V	E	Q	D	A	E	G	E	A	L	H	L	V	T	T	G	V	V	R	V	S	R	V	S	L	R	E	R	V	L	G	D	I	Y	A	P	G	V	V	G	E	T	A	V	L	A	H	Q	E	R	S	A	S	V	R	A	L
Template Known Secondary structure											T								T	T		.	B				T	T		T	T	T							S	S																			S	S				S	T	T	T	T	T												S
Template Predicted Secondary structure																						.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																							.																																										.	.	.	.
Query SS confidence																							.																																										.	.	.	.
Query Sequence		G	N	C	T	G	Y	H	L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q	.	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	.	.	.	.	W	N	E	E	L	R	S	R	I	G	V	M	N
Query Conservation																							.																																										.	.	.	.
Alig confidence																							.																																										.	.	.	.
Template Conservation
Template Sequence		T	P	V	R	T	L	X	L	H	R	E	H	F	E	L	I	L	R	R	H	P	R	V	L	W	N	L	A	E	X	L	A	R	R	V	T	F	L	N	D	E	L	I	A	F	G	Q	N	T	E	A	A	L	T	H	V	F	A	N	L	Y	R	Q	R	L	A	A	G	V	P	Q	P	E	V	L	P	L	G	T	Q
Template Known Secondary structure		S																																																																			T		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	H	Q	R	T	R	I	S	R	S	V	V	A	E	V	L	A	A	L	R	K	G	G	Y	I	E	M	N	K	G	K	L	V	A	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	X	A	R	T	S	S	S	R	E	T	V	S	R	V	L	K	R	L	E	A	H	N	I	L	E	V	S	P	R	S	V	T	L	L	D
Template Known Secondary structure								T																T	T	S					S	S					S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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