Job Description P0AAP5 Confidence 99.90% Date Thu Jan 5 11:13:26 GMT 2012 Rank 12 Aligned Residues 182 % Identity 12% Template c3e6dA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:cyclic nucleotide-binding protein; PDBTitle: crystal structure of cprk c200s Resolution 2.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		D	K	C	L	S	R	Y	G	T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	.	.	.	.	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E	G
Query Conservation																																																.	.	.	.
Alig confidence																			.																													.	.	.	.																		.	.	.
Template Conservation																			.																																																		.	.	.
Template Sequence		L	R	N	Y	T	Q	M	G	L	I	R	D	F	A	K	G	S	.	A	V	I	M	P	G	E	E	I	T	S	M	I	F	L	V	E	G	K	I	K	L	D	I	I	F	E	D	G	S	E	K	L	L	Y	Y	A	G	G	N	S	L	I	G	K	L	Y	P	T	.	.	.	G	N	N	I	Y	A	T	A	M	E
Template Known Secondary structure		G	G	G	G	G	G	G	S							T	T		.					T	T												S									T	T	S										T	T						S	S			.	.	.	S								S	S
Template Predicted Secondary structure																			.																																																		.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		N	C	T	G	Y	H	L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q	.	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	W	N	E	E	L	R	S	R	I	G	V	M	N	Y	I	H	Q	R
Query Conservation																						.
Alig confidence																						.																																															.
Template Conservation																																																																					.
Template Sequence		P	T	R	T	C	W	F	S	E	K	S	L	R	T	V	F	R	T	D	E	D	M	I	F	E	I	F	K	N	Y	L	T	K	V	A	Y	Y	A	R	Q	V	P	T	I	R	I	L	R	L	F	Y	E	L	C	S	S	Q	G	K	R	V	G	D	T	Y	E	I	.	T	M	P	L	S	Q	K	S	I	G	E	I
Template Known Secondary structure		S																			T																																										T	T					.
Template Predicted Secondary structure																																																																					.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	I	S	R	S	V	V	A	E	V	L	A	A	L	R	K	G	G	Y	I	E	M	N	K	G	K	L	V	A	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	V	H	H	V	T	V	S	R	V	L	A	S	L	K	R	E	N	I	L	D	K	K	K	N	K	I	I	V	Y	N
Template Known Secondary structure																			T	T	S					T	T					S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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