Job Description P0AAP5 Confidence 99.90% Date Thu Jan 5 11:13:26 GMT 2012 Rank 10 Aligned Residues 186 % Identity 14% Template c3d0sA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: camp receptor protein from m.tuberculosis, camp-free form Resolution 2.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		D	K	C	L	S	R	Y	G	T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	.	.	.	.	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E	G
Query Conservation																																																.	.	.	.
Alig confidence																			.																													.	.	.	.
Template Conservation																			.
Template Sequence		I	A	A	L	T	K	Q	L	Q	P	V	D	F	P	R	G	H	.	T	V	F	A	E	G	E	P	G	D	R	L	Y	I	I	I	S	G	K	V	K	I	G	R	R	A	P	D	G	R	E	N	L	L	T	I	M	G	P	S	D	M	F	G	E	L	S	I	F	D	P	G	P	R	T	S	S	A	T	T	I	T
Template Known Secondary structure		T					T	T	S							T	T		.					T	T												S									T	T	S										T	T				S						S		S			S	S					S	S
Template Predicted Secondary structure																			.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.							.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																						.																																										.	.	.	.	.	.
Query SS confidence																						.																																										.	.	.	.	.	.
Query Sequence		N	C	T	G	Y	H	L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q	.	L	W	R	D	A	F	Y	W	L	A	W	Q	N	R	I	L	E	L	R	D	V	Q	L	I	G	H	N	S	Y	E	Q	I	R	A	T	L	L	S	M	I	D	.	.	.	.	.	.	W	N	E	E	L	R	S	R	I	G	V	M
Query Conservation																						.																																										.	.	.	.	.	.
Alig confidence																						.																																										.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	R	A	V	S	M	D	R	D	A	L	R	S	W	I	A	D	R	P	E	I	S	E	Q	L	L	R	V	L	A	R	R	L	R	R	T	N	N	N	L	A	D	L	I	F	T	D	V	P	G	R	V	A	K	Q	L	L	Q	L	A	Q	R	F	G	T	Q	E	G	G	A	L	R	V	T	H	D	L	T	Q
Template Known Secondary structure																T	T	S	S																													S																						T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	I	H	Q	R	T	R	I	S	R	S	V	V	A	E	V	L	A	A	L	R	K	G	G	Y	I	E	M	N	K	G	K	L	V	A	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	I	A	Q	L	V	G	A	S	R	E	T	V	N	K	A	L	A	D	F	A	H	R	G	W	I	R	L	E	G	K	S	V	L	I	S	D
Template Known Secondary structure									T	S															T	T	S					T	T					S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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