Job Description P0AAP5 Confidence 99.37% Date Thu Jan 5 11:13:26 GMT 2012 Rank 36 Aligned Residues 110 % Identity 12% Template c2ptmA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hyperpolarization-activated (ih) channel; PDBTitle: structure and rearrangements in the carboxy-terminal region of spih2 channels Resolution 1.93 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	D	K	C	L	S	R	Y	G	T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E	G	N
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		S	N	F	V	T	R	V	V	T	L	L	E	F	E	V	F	Q	P	A	D	.	Y	V	I	Q	E	G	T	F	G	D	R	M	F	F	I	Q	Q	G	I	V	D	I	I	M	S	D	G	V	I	A	T	S	L	S	D	G	S	Y	F	G	E	I	C	L	L	T	R	E	R	R	V	A	S	V	K	C	E	T	Y
Template Known Secondary structure																			T	T		.					T	T	S			S															T	T	S								T	T				S							S	S			S	S					S	S
Template Predicted Secondary structure																						.
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570		.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	G	Y	H	L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q	L	W	R	D	A	F	Y	W	L	A	W	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	T	L	F	S	L	S	V	Q	H	F	N	Q	V	L	D	E	F	P	A	M	R	K	T	M	E	E	I	A	V	R
Template Known Secondary structure																																T
Template Predicted Secondary structure
Template SS confidence
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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