Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAP5
Confidence39.90%DateThu Jan 5 11:13:26 GMT 2012
Rank487Aligned Residues59
% Identity10%Templatec2plyB_
PDB info PDB header:translation/rnaChain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna.
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170 .........180.........190.......
Predicted Secondary structure 









..








Query SS confidence 

































. .


























Query Sequence  NSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRT. . RISRSVVAEVLAALRKGGYIEMNKGKL
Query Conservation      

   
  
            
   

   ..
 

  
 
 
  
   
 
   

 
Alig confidence 






















..








..


























Template Conservation       
   
  

   
   
 .. 
 

               

  
   
 
      
Template Sequence  AWWQAVTRALEEFHSRYPLRPGL. . AREELRSRYFSRLPARVYQALLEEWSREGRLQLAANTV
Template Known Secondary structure 
TTS

..
TTS
TT

SS
Template Predicted Secondary structure 






..










Template SS confidence 






























































   442.......450.........460.... .....470.........480.........490.........500..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions