Job Description P0AAP5 Confidence 87.93% Date Thu Jan 5 11:13:26 GMT 2012 Rank 228 Aligned Residues 67 % Identity 7% Template c2pfwB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution Resolution 1.90 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E	G	N	C	T	G	Y	H	L
Query Conservation
Alig confidence																		.																						.	.										.	.	.	.	.
Template Conservation																		.																						.	.										.	.	.	.	.
Template Sequence		V	K	I	W	F	D	K	G	A	E	G	Y	V	H	A	H	.	R	H	S	Q	V	S	Y	V	V	E	G	E	F	H	V	N	V	D	G	V	I	.	.	K	V	L	T	A	G	D	S	F	.	.	.	.	.	F	V	P	P	H	V	D	H	G	A	V	C	P	T	G	G	I	L	I	D	T
Template Known Secondary structure								T	T									.	S	S																T	T			.	.					T	T				.	.	.	.	.				T	T								T	T
Template Predicted Secondary structure																		.																						.	.										.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions