Job Description P0AAP5 Confidence 98.92% Date Thu Jan 5 11:13:26 GMT 2012 Rank 62 Aligned Residues 98 % Identity 10% Template c2d93A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rap guanine nucleotide exchange factor 6; PDBTitle: solution structure of the cnmp_binding domain of human rap2 guanine nucleotide exchange factor 6 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	D	K	C	L	S	R	Y	G	T	R	F	E	F	N	N	E	K	Q	V	I	F	S	S	D	V	N	N	E	D	T	F	V	I	L	E	G	V	I	S	L	R	R	E	E	N	V	L	I	G	I	T	Q	A	P	Y	I	M	G	L	A	D	G	L	M	K	N	D	I	P	Y	K	L	I	S	E	G	N
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		M	S	V	R	R	E	L	C	S	V	M	I	F	E	V	V	E	Q	A	G	A	I	I	L	E	D	G	Q	E	L	D	S	W	Y	V	I	L	N	G	T	V	E	I	S	.	H	P	D	G	K	V	E	N	L	F	M	G	N	S	F	G	I	T	P	T	L	D	K	Q	Y	M	H	G	I	V	R	T	K	V	D
Template Known Secondary structure									T	T	T								S	S	S						T	T											B	S						.		S	S	S							T	T				S			S	S	S							S					S	S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
			92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	C	T	G	Y	H	L	P	A	K	Q	T	I	T	L	I	E	Q	N	Q
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		D	C	Q	F	V	C	I	A	Q	Q	D	Y	W	R	I	L	N	H	V	E
Template Known Secondary structure		S															S	S			S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions