Job Description P41066 Confidence 4.18% Date Thu Jan 5 12:01:23 GMT 2012 Rank 84 Aligned Residues 77 % Identity 17% Template c2q1fA_ PDB info PDB header:lyase Chain: A: PDB Molecule:chondroitinase; PDBTitle: crystal structure of chondroitin sulfate lyase abc from bacteroides2 thetaiotaomicron wal2926 Resolution 2.85 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																												.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	T	V	V	P	M	V	N	G	G	Q	A	S	I	A	I	S	N	T	S	P	N	L	F	T	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	R	I	I	A	V	N	S	L	D	G	A	L	T	N	N	E	Q	T	A	S	G	G	V
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		T	S	C	L	V	X	V	R	K	E	S	A	D	K	V	L	L	T	V	A	Q	P	D	L	A	L	Y	R	G	P	S	D	E	A	F	D	K	D	G	K	R	X	E	R	S	I	Y	S	R	P	W	I	D	N	E	S	G	E	I	P	V	T	V	T	L	K	G	R	W	K	V	V	E	T	P	Y	.	.	.	C
Template Known Secondary structure		S	S								S	S	S	S													S	S		S	S					B		S	S	S		B					G	G	G		T	T	T	T														S							B	T	T	.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.				.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	T	V	N	K	K	P	F	T	F	I	L	E	T	E	R	G	L	N	L	S	I	Q	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	V	S	E	D	K	K	Q	T	V	L	R	F	L	C	K	D	G	A	S	Y	E	V	E	L	E
Template Known Secondary structure								S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		987	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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