Job Description P41066 Confidence 4.79% Date Thu Jan 5 12:01:23 GMT 2012 Rank 67 Aligned Residues 51 % Identity 22% Template c2p3wB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:probable serine protease htra3; PDBTitle: crystal structure of the htra3 pdz domain bound to a phage-derived2 ligand (fgrwv) Resolution 1.70 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	R	I	I	A	V	N	S	L	D	G	A	L	T	N	N	E	Q	T	A	S	G	G	V	V	V	A	T	V	N	K	K	P	F	T	F	I	L	E	T	E	R	G	L	N	L	S	I	Q	A	V	P	R	E	G	A	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.																												.
Template Conservation											.	.	.	.	.	.	.																												.
Template Sequence		D	G	D	I	I	V	K	V	N	.	.	.	.	.	.	.	G	R	P	L	V	D	S	S	E	L	Q	E	A	V	L	T	E	S	P	L	L	L	E	V	R	R	G	.	N	D	D	L	L	F	S	I	A	P	E	V	V	M	G
Template Known Secondary structure		T	T							T	.	.	.	.	.	.	.	T					S												S	S								T	.	T														S
Template Predicted Secondary structure											.	.	.	.	.	.	.																												.
Template SS confidence
		404	.	.	.	.	.	410	.	.								.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions