Job Description P77739 Confidence 100.00% Date Thu Jan 5 12:32:23 GMT 2012 Rank 3 Aligned Residues 277 % Identity 13% Template c3ovcA_ PDB info PDB header:transferase/antibiotic Chain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia Resolution 1.95 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	S	R	L	L	S	E	Q	L	G	E	G	E	I	E	L	R	N	E	L	P	G	G	E	V	H	A	A	W	H	L	R	Y	A	G	H	D	F	F	V	K	C	D	E	R	E	L	L	P	G	F	T	A	E	A	D	Q	L	E	L	L	S	R	S	K	T	V	T	V	P	K	V	W	A	V	G	A	D	R
Query Conservation
Alig confidence													.	.																																					.	.																.
Template Conservation													.	.																																					.	.																.
Template Sequence		S	V	E	K	F	L	I	E	K	F	D	.	.	S	V	S	D	L	X	Q	L	S	E	G	E	E	S	R	A	F	S	F	D	V	G	G	R	G	Y	V	L	R	V	N	S	C	A	D	G	.	.	F	Y	K	D	R	Y	V	Y	R	H	F	A	S	A	A	.	L	P	I	P	E	V	L	D	I	G	E	F	S
Template Known Secondary structure											S	S	.	.												S	S									T	T									S					.	.														S	S	.	S											S	S
Template Predicted Secondary structure													.	.																																					.	.																.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.
		84	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure				.																																										.	.
Query SS confidence				.																																										.	.
Query Sequence		D	Y	.	S	F	L	V	M	D	Y	L	P	P	R	P	L	D	A	H	S	A	F	I	L	G	Q	Q	I	A	R	L	H	Q	W	S	D	Q	P	Q	F	G	L	D	F	.	.	D	N	A	L	S	T	T	P	Q	P	N	T	W	Q	R	R	W	S	T	F	F	A	E	Q	R	I	G	W	Q	L	E	L	A	A
Query Conservation				.																																										.	.
Alig confidence				.																																										.	.
Template Conservation
Template Sequence		E	S	L	T	Y	C	I	S	R	R	A	Q	G	V	T	L	Q	D	L	P	E	T	E	L	P	A	V	L	Q	P	V	A	E	A	X	D	A	I	A	A	A	D	L	S	Q	T	S	G	F	G	P	F	G	P	Q	G	I	G	Q	Y	T	T	W	R	D	F	I	C	A	I	A	D	P	H	V	Y	H	W	Q	T
Template Known Secondary structure		S	S											S			T	T	T	S		G	G	G	S	G	G	G																	T	T		B							T	T	S	B				S	S							G	G	G		T	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.
Predicted Secondary structure			.																																													.								.																						.	.
Query SS confidence			.																																													.								.																						.	.
Query Sequence		E	.	K	G	I	A	F	G	N	I	D	A	I	V	E	H	I	Q	Q	R	L	A	S	H	Q	P	Q	P	S	L	L	H	G	D	L	W	S	G	N	C	A	L	G	P	D	G	.	P	Y	I	F	D	P	A	.	C	Y	W	G	D	R	E	C	D	L	A	M	L	P	L	H	T	E	Q	P	P	.	.	Q	I
Query Conservation			.																																													.								.																						.	.
Alig confidence			.																																													.								.																						.	.
Template Conservation
Template Sequence		V	X	D	D	T	V	S	A	S	V	A	Q	A	L	D	E	L	X	L	W	A	E	D	C	P	E	V	R	H	L	V	H	A	D	F	G	S	N	N	V	L	T	D	N	G	R	I	T	A	V	I	D	W	S	E	A	X	F	G	D	S	Q	Y	E	V	A	N	I	F	F	W	R	P	W	L	A	C	X	E	Q
Template Known Secondary structure					T	T	T															G	G	G										S	S		S	S	T	T					T	T									T	T						T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																.	.	.					.
Query SS confidence																																.	.	.					.
Query Sequence		Y	D	G	Y	Q	S	V	S	P	L	P	A	D	F	L	E	R	Q	P	V	Y	Q	L	Y	T	L	L	N	R	A	.	.	.	R	L	F	G	.	G	Q	H	L	V	I	A	Q	Q	S	L	D	R	L	L	A
Query Conservation																																.	.	.					.
Alig confidence																																.	.	.					.
Template Conservation
Template Sequence		Q	T	R	Y	F	E	R	R	H	P	E	L	A	G	S	P	R	L	R	A	Y	X	L	R	I	G	L	D	Q	L	Y	Q	S	L	V	D	G	N	F	D	D	A	A	W	A	Q	G	R	C	D	A	I	V	R
Template Known Secondary structure											S	S	S	S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions