Job Description P77739 Confidence 94.32% Date Thu Jan 5 12:32:23 GMT 2012 Rank 186 Aligned Residues 77 % Identity 18% Template c3mi9A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:cell division protein kinase 9; PDBTitle: crystal structure of hiv-1 tat complexed with human p-tefb Resolution 2.10 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.										.	.	.	.	.
Query SS confidence																								.	.										.	.	.	.	.
Query Sequence		G	E	I	E	L	R	N	E	L	P	G	G	E	V	H	A	A	W	H	L	R	Y	.	.	A	G	H	D	F	F	V	K	C	.	.	.	.	.	D	E	R	E	L	L	P	G	F	T	A	E	A	D	Q	L	E	L	L	S	R	S	K	T	V	T	V	P	K	V	W	A	V	G	A	D	R	D	Y	S	F	L
Query Conservation																								.	.										.	.	.	.	.
Alig confidence																								.	.										.	.	.	.	.																				.	.	.
Template Conservation																																																											.	.	.
Template Sequence		S	K	Y	E	K	L	A	K	I	G	Q	G	T	F	G	E	V	F	K	A	R	H	R	K	T	G	Q	K	V	A	L	K	K	V	L	M	E	N	E	K	E	G	F	P	I	T	A	L	R	E	I	K	I	L	Q	L	L	.	.	.	K	H	E	N	V	V	N	L	I	E	I	C	R	T	K	G	S	I	Y	L
Template Known Secondary structure		G	G								S	S		S	T	T	S							T	T	T												S	S		S	S	S	S															.	.	.			T	T	B
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		89	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	D	Y	L	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	F	D	F	C	E	H
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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