Job Description P77739 Confidence 99.93% Date Thu Jan 5 12:32:23 GMT 2012 Rank 18 Aligned Residues 266 % Identity 11% Template c3c5iD_ PDB info PDB header:transferase Chain: D: PDB Molecule:choline kinase; PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520 Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40											.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence														.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		Q	A	I	S	R	L	L	S	E	Q	L	G	.	.	.	.	.	E	G	E	I	E	L	R	N	E	L	P	G	G	E	V	H	A	A	W	H	L	R	Y	A	G	H	.	.	.	.	.	.	.	.	.	.	D	F	F	V	K	C	D	E	R	E	L	L	P	G	F	.	.	T	A	E	A	D	Q	L	E	L	L
Query Conservation														.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence														.	.	.	.	.											.	.															.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																													.	.
Template Sequence		L	Y	I	K	K	I	C	L	E	K	V	P	E	W	N	H	F	T	E	D	N	L	R	V	K	Q	I	.	.	L	L	T	N	Q	L	F	E	V	G	L	K	E	E	T	A	N	N	Y	N	S	I	R	T	R	V	L	F	R	I	Y	G	K	H	V	D	E	L	Y	N	T	I	S	E	F	E	V	Y	K	T	M
Template Known Secondary structure													G	G	G	T	T			G	G	G							.	.				S															S	T	T	S											T	T	G	G	G	T	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		S	R	S	K	T	V	T	V	P	K	V	W	A	V	G	A	D	R	D	Y	S	F	L	V	M	D	Y	L	P	P	R	P	L	D	A	H	S	A	F	.	.	I	L	G	Q	Q	I	A	R	L	H	Q	W	S	D	Q	P	Q	F	G	L	D	F	D	N	A	L	S	T	T	P	Q	P	N	T	W	Q	R	R	W
Query Conservation																																									.	.
Alig confidence							.	.											.	.	.	.																			.	.
Template Conservation							.	.											.	.	.	.
Template Sequence		S	K	Y	K	I	.	.	A	P	Q	L	L	N	T	F	N	G	.	.	.	.	G	R	I	E	E	W	L	Y	G	D	P	L	R	I	D	D	L	K	N	P	T	I	L	I	G	I	A	N	V	L	G	K	F	H	T	L	S	R	K	R	H	L	P	E	H	W	D	R	T	P	C	I	F	K	M	M	E	K	W
Template Known Secondary structure				T	T	S	.	.	S								T	T	.	.	.	.									S					G	G	G	G	G																	T					S				T	T	S			S
Template Predicted Secondary structure							.	.											.	.	.	.
Template SS confidence
		95	.	.	.	.			100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		S	T	F	F	A	E	Q	R	I	G	W	Q	L	E	L	A	A	E	K	G	I	A	F	G	N	I	D	A	I	V	E	H	I	Q	Q	R	L	A	S	H	Q	P	Q	P	S	L	L	H	G	D	L	W	S	G	N	C	A	L	G	P	D	G	P	Y	I	F	D	P	A	.	C	Y	W	G	D	R	E	C	D	L
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		K	N	Q	L	F	K	Y	K	N	I	E	K	Y	N	C	D	I	H	K	Y	I	K	E	S	D	K	F	I	K	F	M	K	V	Y	S	K	S	D	N	L	A	N	T	I	V	F	C	H	N	D	L	Q	E	N	N	I	I	N	T	N	K	C	L	R	L	I	D	F	E	Y	S	G	F	N	F	L	A	T	D	I
Template Known Secondary structure						T	T	S	T	T	G	G	G	T		S	S																			T	T	S			G	G	G							S			S	G	G	G					S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.																							.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		A	M	L	P	L	H	T	E	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	I	Y	D	G	Y	Q	S	V	S	P	L	P	A	D	F	.	.	.	.	.	L	E	R	Q	P	V	Y	Q	L	Y	T	L	L	N	R	A	R	L	F	G	G	Q	H	L	V	I
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																			.	.	.
Template Conservation																																																																										.	.	.
Template Sequence		A	N	F	F	I	E	T	S	I	D	Y	S	V	S	S	Y	P	F	F	E	I	D	K	K	K	Y	I	S	Y	E	N	R	K	L	F	I	T	A	Y	L	S	N	Y	L	D	K	V	V	P	T	P	K	L	I	D	E	I	L	E	A	V	E	V	Q	A	L	G	A	H	L	L	W	.	.	.	G	F	W	S	I
Template Known Secondary structure								T	T							S	T	T	S					G	G	G	S																		S																													.	.	.
Template Predicted Secondary structure																																																																										.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320				.	.	.	.	.
		276	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	G	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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