Return to main results Retrieve Phyre Job Id

Job DescriptionP77739
Confidence88.98%DateThu Jan 5 12:32:23 GMT 2012
Rank247Aligned Residues82
% Identity6%Templatec2xs0A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:mitogen-activated protein kinase 8; PDBTitle: linear binding motifs for jnk and for calcineurin antagonistically2 control the nuclear shuttling of nfat4
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30...... ...40...... ...50.........60.........70.........80........
Predicted Secondary structure 









..

.....


















Query SS confidence 




















. .









. . . . .









































Query Sequence  GEIELRNELPGGEVHAAWHLR. . YAGHDFFVKC. . . . . DERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFL
Query Conservation    
  
  
 

  
 

 
 ..      


 .....           
   
  
        
              
Alig confidence 




















..









.....









































Template Conservation    
 
   

 
 

 

          



 
               

 

  
 
 


                 
Template Sequence  KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD
Template Known Secondary structure  TTTTTTTT
TTSS


TTB


SS
STTT

Template Predicted Secondary structure 




































Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   8990.......
Predicted Secondary structure 




Query SS confidence 








Query Sequence  VMDYLPPRP
Query Conservation           
Alig confidence 








Template Conservation    

 
   
Template Sequence  VYIVMELMD
Template Known Secondary structure 

S
Template Predicted Secondary structure 


Template SS confidence 








   104.....110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions