Job Description P77739 Confidence 99.93% Date Thu Jan 5 12:32:23 GMT 2012 Rank 21 Aligned Residues 273 % Identity 15% Template c1nw1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase (49.2 kd); PDBTitle: crystal structure of choline kinase Resolution 2.02 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.							.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.									.
Query SS confidence																.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.									.
Query Sequence		Q	A	I	S	R	L	L	S	E	Q	L	G	E	G	.	.	.	.	.	.	E	I	E	L	R	N	E	L	P	G	G	E	V	H	A	A	W	H	L	R	Y	A	G	H	D	.	.	.	.	.	.	.	.	.	F	F	V	K	C	D	E	R	.	E	L	L	P	G	F	T	A	E	A	D	Q	L	E	L	L	S
Query Conservation																.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.									.
Alig confidence																.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		E	R	A	H	M	L	C	A	R	F	L	G	G	A	W	K	T	V	P	L	E	H	L	R	I	S	R	I	K	G	G	M	S	N	M	L	F	L	C	R	L	S	E	V	Y	P	P	I	R	N	E	P	N	K	V	L	L	R	V	Y	F	N	P	E	T	E	S	H	L	V	A	E	S	V	I	F	T	L	L	S
Template Known Secondary structure														T							G	G	G										T	T										T	T	S			S	S	S			S									S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		R	S	K	T	V	T	V	P	K	V	W	A	V	G	A	D	R	D	Y	S	F	L	V	M	D	Y	L	P	P	R	P	L	D	A	H	S	A	F	I	L	G	Q	Q	I	A	R	L	H	Q	W	S	D	Q	P	Q	F	G	L	D	F	D	N	A	L	S	T	T	.	P	Q	P	N	T	W	Q	R	R	W	S	T
Query Conservation																																																																					.
Alig confidence					.	.											.	.	.	.																																																	.
Template Conservation					.	.											.	.	.	.
Template Sequence		E	R	H	.	.	L	G	P	K	L	Y	G	I	F	S	.	.	.	.	G	G	R	L	E	E	Y	I	P	S	R	P	L	S	C	H	E	I	S	L	A	H	M	S	T	K	I	A	K	R	V	A	K	V	H	Q	L	E	V	P	I	W	K	E	P	D	Y	L	C	E	A	L	Q	R	W	L	K	Q	L	T	G
Template Known Secondary structure			T	T	.	.	S	S	S							T	.	.	.	.	T														T	T	G	G	G	S															T	T				S	S			S	S
Template Predicted Secondary structure					.	.											.	.	.	.
Template SS confidence
		134	.	.			.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		F	F	A	E	Q	R	I	G	W	Q	L	E	L	A	A	E	K	G	I	A	F	G	N	I	D	A	I	V	E	H	I	Q	Q	R	L	A	S	H	Q	P	Q	P	S	L	L	H	G	D	L	W	S	G	N	C	A	L	G	P	D	G	P	Y	I	F	D	P	A	.	C	Y	W	G	D	R	E	C	D	L	A	M
Query Conservation																																																																					.
Alig confidence																																																											.										.
Template Conservation																																																											.
Template Sequence		T	V	D	A	E	H	R	F	D	L	P	E	E	C	G	V	S	S	V	N	C	L	D	L	A	R	E	L	E	F	L	R	A	H	I	S	L	S	K	S	P	V	T	F	C	H	N	D	L	Q	E	G	N	I	L	L	P	.	K	R	L	V	L	I	D	F	E	Y	A	S	Y	N	Y	R	A	F	D	F	A	N
Template Known Secondary structure			S		T	T							G	G	G	S																					T	T										S				G	G	G					.									T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		225	.	.																							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Query Sequence		L	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	E	Q	P	P	Q	I	Y	D	G	Y	Q	S	V	S	P	L	P	A	D	F	L	E	R	Q	P	V	Y	Q	L	Y	T	L	L	N	R	A	.	.	.	.	R	L	F	G	G	Q	H	L	V	I	A	Q	Q
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.					.
Template Conservation																																																																									.
Template Sequence		H	F	I	E	W	T	I	D	Y	D	I	D	E	A	P	F	Y	K	I	Q	T	E	N	F	P	E	N	D	Q	M	L	E	F	F	L	N	Y	L	R	E	Q	G	N	T	R	E	N	E	L	Y	K	K	S	E	D	L	V	Q	E	T	L	P	F	V	P	V	S	H	F	F	W	.	G	V	W	G	L	L	Q	V
Template Known Secondary structure						T	T						S	S	T	T	S					G	G	G	S																		T		S		G	G	G													G	G	G									.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.
		279	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	S	P	V
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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