 |
Job Description | P0CF70 | Confidence | 59.54% | Date | Wed Jan 25 15:20:37 GMT 2012 |
Rank | 410 | Aligned Residues | 33 |
% Identity | 18% | Template | c3cdlA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:transcriptional regulator aefr; |
PDBTitle: crystal structure of a tetr family transcriptional regulator from2 pseudomonas syringae pv. tomato str. dc3000
|
Resolution | 2.36 Å |
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | P | E | F | R | S | E | A | L | K | L | A | E | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
I | G | V | T | A | A | A | R | E | L | S | L | Y | E | S | Q | L | Y | N |
Query Conservation |   |
|   |
|
|
|   |   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |
Template Sequence |   |
T | D | Q | K | R | E | S | I | V | Q | A | A | I | A | E | F | G | D | R | G | F | E | I | T | S | X | D | R | I | A | A | R | A | E | V | S | K | R | T | V | Y | N |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|