Job Description P0CF70 Confidence 67.58% Date Wed Jan 25 15:20:37 GMT 2012 Rank 345 Aligned Residues 36 % Identity 14% Template c2vi6F_ PDB info PDB header:transcription Chain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain Resolution 2.6 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		Q	H	S	P	E	F	R	S	E	A	L	K	L	A	E	R	I	G	.	.	.	.	.	.	V	T	A	A	A	R	E	L	S	L	Y	E	S	Q	L	Y	N	W
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	S	Q	A	Q	L	C	A	L	K	D	R	F	Q	K	Q	K	Y	L	S	L	Q	Q	M	Q	E	L	S	S	I	L	N	L	S	Y	K	Q	V	K	T	W
Template Known Secondary structure																			S															T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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