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Job Description | P0CF70 | Confidence | 55.73% | Date | Wed Jan 25 15:20:37 GMT 2012 |
Rank | 438 | Aligned Residues | 48 |
% Identity | 25% | Template | c1ic8B_ |
PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:hepatocyte nuclear factor 1-alpha; |
PDBTitle: hepatocyte nuclear factor 1a bound to dna : mody3 gene2 product
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Resolution | 2.60 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | K | T | V | S | T | S | K | K | P | R | K | Q | H | S | P | E | F | R | S | E | A | L | K | L | A | E | R | I | G | . |
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L | Y | E | S | Q | L | Y | N | W |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | V | A | Q | Q | F | T | H | R | N | R | F | K | W | G | P | A | S | Q | Q | I | L | F | Q | A | Y | E | R | Q | K | N | P | S | K | E | E | R | E | T | L | V | E | E | C | N | R | A | E | C | I | Q | R | G | V | S | P | S | Q | A | Q | G | L | G | S | N | L | V | T | E | V | R | V | Y | N | W |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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