Job Description P0CF70 Confidence 98.23% Date Wed Jan 25 15:20:37 GMT 2012 Rank 4 Aligned Residues 91 % Identity 15% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.													.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	K	P	R	K	Q	H	S	P	E	F	R	S	E	A	L	K	L	A	E	R	I	.	.	.	G	V	T	A	A	A	R	E	L	S	L	Y	E	S	Q	L	Y	N	W	R	S	K	Q	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	T	S	S	E	R	E	L	E	M	S	T	E	I	A	R
Query Conservation																									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	P	K	R	R	Q	L	T	F	R	E	K	S	R	I	I	Q	E	V	E	E	N	P	D	L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P	Y	D	K	L	E	G	L
Template Known Secondary structure					S	S																			T	T	S										T												T												G	G	G	G	G	T								T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		73	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		L	K	R	Q	L	A	E	R	D	.	.	.	.	.	E	E	L	A	I	L	Q	K	A	A	T	Y	F	A	K	R	L
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.
Template Conservation
Template Sequence		L	I	A	W	F	Q	Q	I	R	A	A	G	L	P	V	K	G	I	I	L	K	E	K	A	L	R	I	A	E	E	L
Template Known Secondary structure										G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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