 |
| Job Description | A5A624 | | Confidence | 1.16% | Date | Thu Jan 5 10:55:27 GMT 2012 |
| Rank | 67 | Aligned Residues | 25 |
| % Identity | 28% | Template | c2kadB_ |
| PDB info |
PDB header:membrane protein | Chain: B: PDB Molecule:transmembrane peptide of matrix protein 2; |
PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain
|
| Resolution | UNK |
|
| | |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | | | | | | |
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
D | K | A | I | I | V | L | G | A | L | I | A | L | L | E | L | I | R | F | L | L | Q | L | L | N |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
| |
|
|
|
|
|
|
|
|
| |
|
|
|
|
|
| |
| Template Sequence | |
S | D | P | L | V | V | A | A | S | I | I | G | I | L | H | L | I | A | W | I | L | D | R | L | X |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | |
| . |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | | | | | | | | | | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
